Tumblr

SBGridTV

  • A hexameric building block of the capsid of the Bovine Leukemia Virus from Alejandro Buschiazzo's group.

  • Water molecules from an EM structure. Read more in our story on Bridget Carragher and Clint Potter from the New York Structural Biology Center.

  • Jennifer Doudna's Cas9 enzyme in the CRISPR pathway, published in Science Read more in her webtale.

  • Kevin Corbett's structure of C. elegans PCH-2. Read the story and watch the animated gif.

  • The chromatophore vesicle of purple bacteria comprises hundreds of cooperating proteins to convert sunlight into chemical energy. Image Credit: J. Stone, M. Sener, K. Schulten. Read more.

  • A crystal structure from James Berger's group shows how the heterohexameric origin recognition complex (ORC) can switch between two conformations.

  • Jalview Developer Geoff Barton's desk with the JalviewAbacus (right) and displayed a dendrogram (tree) for the set of sequences shown in the alignment, using Jalview linked to Chimera. Read the full story here.

  • From Michael Sattler's group: the ternary complex involving the tandem RNA recognition motif domains of Sxl, a cold-shock domain of the protein Unr bound to a specific RNA sequence motif. Read the details.

  • The thrombin:anophelin complex (PNAS 109, E3649-E3658) from the lab of Pedro José Barbosa Pereira. Read more about Dr. Pereira's background and current research in our recent webtale.

  •  Project MAC display system, circa 1965,

    The Project MAC display system, circa 1965. Read more about the history of molecular graphics software and UCSF Chimera in our SBGrid Tale featuring Bob Langridge and Tom Ferrin.

  • Professor Catherine Drennan of MIT

    The SBGrid Consortium provides structural biologists worldwide with access to the software they need to discover the shapes of the molecules of life. Read more in eLIFE.

Recent Software Updates:

Name Description Date
BioXTAS RAW

a program for analysis of Small-Angle X-ray Scattering (SAXS) data. The software enables: creation of 1D scattering profiles from 2D detector images, standard data op...

Dec 03
adxv

displays protein crystallography X-ray diffraction data. The data may be displayed as a 2-D image, 3-D wire mesh or as integer pixel values. Data files may be saved in...

Nov 30
CCP4

(Collaborative Computational Project, Number 4) a collection of programs and associated data and software libraries used for macromolecular structure determination by ...

Nov 30
GeRelion

GeRelion is a GPU-enhanced version of RELION, dramatically speeding up 2D/3D classification and 3D auto-refine. GeRelion can be compiled to run in either single preci...

Nov 29
iMODFit

an efficient tool for flexible fitting of atomic structures into EM maps based on Normal Mode Analysis in internal Coordinates.

Nov 28
DIALS

(Diffraction Integration for Advanced Light Sources) a software project for the analysis of crystallographic diffraction images designed to cope with the ever increasi...

Nov 28
Chimera

a highly extensible, interactive molecular graphics program for interactive visualization and analysis of molecular structures and related data, including density maps...

Nov 28
Thanks to the National Science Foundation

With Partial Support from the National Science Foundation Research Coordination Network MCB #0639193 and NSF EAGER #1448069. Please cite SBGrid's eLife paper and follow our publication guidelines.

Latest news

SBGrid Lunch Break with Abhishek Singharoy

Please join us December 6th to hear Abhishek Singharoy, from Klaus Schulten's lab at the Beckman Institute and University of Illinois at Urbana Champaign, present on xMDFF, a new molecular ...

SBGrid Lunch Break with Aaron Brewster

Please join us January 10th, in the first of two xfel webinars, to learn about Processing serial crystallographic data using cctbx.xfel and DIALS. Aaron Brewster, Project Scientist at Lawrence Berkeley ...

SBGrid Lunch Break: IOTA and PRIME

Tune in January 17th, in a follow up to last week's webinar on cctbx.xfel and DIALS, to learn how to **Get the most out of your XFEL data with IOTA ...