Supported Applications

Voronota

Description

a tool for analysis of atomic neighborhoods in molecular structures using a Voronoi diagram of balls determined from the atomic model. It is especially suitable for processing three-dimensional structures of biological macromolecules such as proteins and RNA.
Usage
To list all executables provided by Voronota, run: $ sbgrid-list voronota
Installation
Use the following command to install this title with the CLI client: $ sbgrid-cli install voronota Available operating systems: Linux 64, OS X INTEL
Primary Citation*

K. Olechnovič and C. Venclovas. 2014. Voronota: A fast and reliable tool for computing the vertices of the Voronoi diagram of atomic balls. Journal of computational chemistry. 35(8): 672-81.
- *Full citation information available through

Keywords

Protein Structure Analysis, Structure Visualization & Analysis
Default Versions

Linux 64: 1.22.3149 (161.2 MB)
OS X INTEL: 1.22.3149 (165.6 MB)
Other Versions
- OS X INTEL:
  1.21.3070 (145.3 MB)
Developers

Kliment Olechnovic