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SBGridTV

Supported Applications

SuperFold

  • Description

    a pipeline that uses data obtained from ShapeMapper to model RNA secondary structures, including pseudoknots; identify de novo regions with well-defined and stable structures; and visualize most probable and alternative helices.

  • Primary Citation*

    N. A. Siegfried, S. Busan, G. M. Rice, J. A. Nelson, and K. M. Weeks. 2014. RNA motif discovery by SHAPE and mutational profiling (SHAPE-MaP). Nature Methods. 11(9): 959-965.

    • *Full citation information available through

  • Categories

  • Default Versions

    Linux 64 1.0
    OS X INTEL 1.0

  • Developers

    Steven Busan, Julie Nelson, Greggory Rice, Nathan Siegfried, Kevin Weeks.

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