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Supported Applications

MAFFT

  • Description

    a multiple sequence alignment program for unix-like operating systems. It offers a range of multiple alignment methods, L-INS-i (accurate; for alignment of <200 sequences), FFT-NS-2 (fast; for alignment of <30,000 sequences).

  • Primary Citation*

    K. Katoh, K. Misawa, K. Kuma, and T. Miyata. 2002. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res. 30(14): 3059-3066.
    (Note: describes the FFT-NS-1, FFT-NS-2 and FFT-NS-i strategies)

    • *Full citation information available through

  • Categories

    Bioinformatics

  • Default Versions

    Linux 64 7.309
    OS X INTEL 7.309

  • Other Available Versions

    Linux 32 6.846
    Linux 32 7.012
    Linux 32 7.032
    Linux 32 7.055
    Linux 64 7.271
    Linux 64 7.273
    OS X INTEL 7.271
    OS X INTEL 7.273
    powermac 6.846

  • Developers

    Katoh Kazutaka.