Supported Applications
HOMER
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Description
(Hypergeometric Optimization of Motif EnRichment) a suite of sequencing analysis and sequence motif discovery tools.
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Usage
To list all executables provided by HOMER, run:$ sbgrid-list homer -
Installation
Use the following command to install this title with the CLI client:$ sbgrid-cli install homerAvailable operating systems: Linux 64, OS X INTEL -
Primary Citation*
S. Heinz, C. Benner, N. Spann, E. Bertolino, Y. Lin, P. Laslo, J. Cheng, C. Murre, H. Singh, and C. Glass. 2010. Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities. Molecular Cell. 38(4): 576-589.
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*Full citation information available through
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Keywords
ChIP-Sequencing, High-throughput sequencing, Motif Discovery
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Default Versions
Linux 64: 4.11 (257.3 MB)
OS X INTEL: 4.11 (222.4 MB) -
Other Versions
Linux 64:
4.7 (78.5 MB) , 4.9 (49.5 MB) -
OS X INTEL:
4.9 (66.3 MB)
Developers
Chris Benner