Supported Applications
HHsuite
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Description
an open-source software package for sensitive protein sequence searching based on the pairwise alignment of hidden Markov models (HMMs).
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Usage
To list all executables provided by HHsuite, run:$ sbgrid-list hhsuite -
Installation
Use the following command to install this title with the CLI client:$ sbgrid-cli install hhsuiteAvailable operating systems: Linux 64, OS X INTEL -
Primary Citation*
M. Steinegger, M. Meier, M. Mirdita, H. Vöhringer, and S. J. H. &. J. Söding. 2019. HH-suite3 for fast remote homology detection and deep protein annotation. BMC Bioinformatics.
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*Full citation information available through
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Keywords
High-throughput sequencing, Protein-protein sequence alignment, Proteomics
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Default Versions
Linux 64: 3.3.0 (278.9 MB)
OS X INTEL: 3.3.0 (257.7 MB) -
Other Versions
Linux 64:
3.0.0 (112.9 MB) , 3.0.3 (53.9 MB) -
OS X INTEL:
3.0.0 (27.4 MB) , 3.0.3 (28.7 MB)
Developers
Johannes Soeding, Martin Steinegger, Milot Mirdita