PyMOL

  • widely used molecular visualization package developed by Warren DeLano, and now maintained by Schödinger, LLC. SBGrid non-profit laboratories have full access to the official incentive builds of PyMOL.

The SBGrid Consortium PyMOL license credentials are contained in the NOTES file in the PyMOL installation directories in your software installation.

Categories

Structure Visualization

Versions

Citations

The PyMOL Molecular Graphics System, Version 1.2r3pre, Schödinger, LLC.

Technical Notes

Pymol is installed with the APBS plugin. Your PDB must be in the following format:

  1. No water or ligand molecules
  2. B-factors < 100
  3. No alternative conformations
  4. No partial occupancies

License Type

This software is distributed under a Non-Profit license.

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