News and Events

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Jan Feb Mar Apr

SBGrid Morning Tea with Jan Brezovsky

Thursday, June 13th at 11:00am EST, join us for a 30-minute webinar to hear Jan Brezovsky, Team Leader at Loschmidt Laboratories in the Czech Republic, discuss "CAVER 3.0: Analysis of Tunnels in Static and Dynamic Protein Structures"



CAVER 3.0: Analysis of Tunnels in Static
and Dynamic Protein Structures
Thursday, June 13th at 11:00am EST
Jan Brezovsky, Ph.D.
Team Leader
Loschmidt Laboratories, Czech Republic

For more information on this application, read the PLOS publication describing CAVER, review the user manual, or take a look at the CAVER website.


Webinar Details: To watch the event, type questions via the webex interface, and listen using your computer speaker, follow this link; Event password: structure
...

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Published April 18, 2013

SBGrid Morning Tea with Steven Lewis

Thursday, May 16th at 11:00am EST, join us for a 30-minute webinar: "ERRASER for RNA structure error correction," presented by Steven Lewis, Postdoc in the Richardson Lab at Duke University.

ERRASER for RNA structure error correction
Thursday, May 16th at 11:00am EST
Steven Lewis
Postdoc, Richardson Lab
Duke University

For more information on ERRASER, read the ERRASER publication.

The Rosetta side of ERRASER will be supplied as part of the Rosetta 3.5 software package, due for release before this webinar. Support is provided via the online manual or the forums. Steven answers questions on the forums.

The PHENIX side of ERRASER is compatible with the most recent version.

ERRASER can be ...

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Published April 5, 2013

SBGrid Morning Tea with Paul Sanschagrin

Thursday, March 28th at 11:00am EST -- Please join us for a 30-minute webinar to get "A basic primer for docking and similarity searching against the ICCB-Longwood database on the SBGrid Goldfinger cluster" presented by Paul Sanschagrin, Sr. Research Systems Administrator at SBGrid.

A basic primer for docking and similarity searching against the ICCB-Longwood databases on the SBGrid Goldfinger cluster
Thursday, March 28th at 11:00am EST
Paul Sanschagrin
Sr. Research Systems Administrator
SBGrid

For more information on the applications that support this tool, visit ICCB-Longwood, and the Schrodinger Glide and Canvas pages.

Webinar Details: To watch the event, type questions via the webex interface, and listen using your computer speaker, follow this link to ...

(link to document)

Published March 10, 2013

SBGrid Morning Tea Break with Graeme Winter

Thursday, April 18th at 11:00am EST -- Please join us for a 30-minute webinar entitled "Automated Data Analysis with xia2" presented by Graeme Winter, Scientist at Diamond Light Source in Oxfordshire, UK.

Automated Data Analysis with xia2
Thursday, April 18th at 11:00am EST
Graeme Winter
Scientist
Diamond Light Source, UK

For more information on xia2, visit the xia2 blog, peruse the website, and read the journal article.

Webinar Details: To watch the event, type questions via the webex interface, and listen using your computer speaker, follow this link to Join the Webinar; Event password: structure
If you would like to participate verbally during the Q&A session, or listen through your telephone, where the ...

(link to document)

Published February 19, 2013

PyMOL Minicourse, March 7th

Thursday, March 7th
SBGrid Minicourse: PyMOL


Presented by PyMOL developers Thomas Holder and Jason Vertrees
Schrödinger, LLC

Host: SBGrid Consortium, Harvard Medical School
Registration for each session will be limited to 25 participants.
Registration Fee: $40

Program Description
On Thursday, March 7th, SBGrid will host a PyMOL Minicourse. The Minicourse will begin with a seminar focusing on new features available in PyMOL. Following the seminar you will be able to choose between two tutorials that will be held in parallel: an introduction to PyMOL and an advanced movie-making session.

Applications are now being accepted to participate in the Minicourse. Selected applicants will be notified by February 15th. Upon completion of this course all participants will receive an SBGrid Minicourse certificate.

Apply for the Minicourse

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Published February 8, 2013

SBGrid Afternoon Tea with Thomas Holder

Thursday, March 7th at 1:00pm EST -- Be sure to join us for a 30-minute webinar entitled "PyMOL Demo, Hints, and New Features" presented by Thomas Holder, PyMOL Developer at Schrodinger.

PyMOL Demo, Hints, and New Features
Thursday, March 7th at 1:00pm EST
Thomas Holder
PyMOL Developer
Schrodinger

For more information on PyMOL, visit the PyMOL website, read the PyMOL wiki, and peruse the Schrodinger website.

Webinar Details: To watch the event, type questions via the webex interface, and listen using your computer speaker, follow this link to Join the Webinar; Event password: structure
If you would like to participate verbally during the Q&A session, or listen through your telephone, where the sound ...

(link to document)

Published January 24, 2013

SBGrid Morning Tea with Tom Goddard

Thursday, February 7th at 11:00am EST, join us for a 30-minute webinar: "Analyzing Molecular Assemblies with UCSF Chimera", presented by Tom Goddard, Programmer/Analyst, Resource for Biocomputing, Visualization, and Informatics, UCSF.

Analyzing Molecular Assemblies with UCSF Chimera
Thursday, February 7th at 11:00am EST
Tom Goddard
Programmer/Analyst
Resource for Biocomputing, Visualization, and Informatics, UCSF

For more information on Chimera, visit the Chimera website and review these materials from a previous demonstration with Alpha Crystallin.


Webinar Details: To watch the event, type questions via the webex interface, and listen using your computer speaker, follow this link; Event password: structure
If you would like to participate verbally during the Q&A session, or listen through your telephone, where the ...

(link to document)

Published January 18, 2013

Stay Tuned for Upcoming Webinar Details

We have an interesting lineup of speakers for our webinar series scheduled to resume in Jan. More details will be posted soon: Feb 7th: Tom Goddard, Chimera
March: Schrodinger, PyMOL
April: Graeme Winter, XIA2
May: Richardson Lab, ERRASER

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Published January 12, 2013

SBGrid Morning Tea Break with Stuart McNicholas

Thursday, January 24th at 11:00am EST, join us for a 30-minute webinar: "The CCP4 Molecular Graphics Program", presented by Stuart McNicholas, Research Fellow and CCP4-funded Developer, University of York.

The CCP4 Molecular Graphics Program
Thursday, January 24th at 11:00am EST
Stuart McNicholas
Research Fellow and CCP4-funded Developer
Dept of Chemistry, University of York

For more information on CCP4MG, visit the CCP4MG website and peruse the software tutorials.


Webinar Details: To watch the event, type questions via the webex interface, and listen using your computer speaker, follow this link to Join the Webinar; Event password: structure
If you would like to participate verbally during the Q&A session, or listen through your telephone, where the sound quality may be ...

(link to document)

Published January 9, 2013